Gauging triple stores with actual biological data
نویسندگان
چکیده
منابع مشابه
Benchmarking Triple Stores with Biological Data
We have compared the performance of five non-commercial triple stores, Virtuoso-open source, Jena SDB, Jena TDB, SWIFT-OWLIM and 4Store. We examined three performance aspects: the query execution time, scalability and run-to-run reproducibility. The queries we chose addressed different ontological or biological topics, and we obtained evidence that individual store performance was quite query s...
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BACKGROUND Biological databases vary enormously in size and data complexity, from small databases that contain a few million Resource Description Framework (RDF) triples to large databases that contain billions of triples. In this paper, we evaluate whether RDF native stores can be used to meet the needs of a biological database provider. Prior evaluations have used synthetic data with a limite...
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Business Intelligence solutions provide different means like OLAP, data mining or case based reasoning to explore data. Standard BI means are usually based on mathematical statistics and provide a quantitative analysis of the data. In this paper, a qualitative approach based on a mathematical theory called ”Formal Concept Analysis” (FCA) is used instead. FCA allows clustering a given set of obj...
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This paper presents a comparison of performance of various triplestore technologies currently in either production release or beta test. Our comparison of triple-store technologies is biased toward a deployment scenario where the triple-store needs to load data and respond to queries over a very large knowledge base (on the order of hundreds of millions of triples.) The comparisons in this pape...
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ژورنال
عنوان ژورنال: BMC Bioinformatics
سال: 2011
ISSN: 1471-2105
DOI: 10.1186/1471-2105-13-s1-s3